To create a project, you should click on the menu tab "New Project". Create a project administrator profile Only the administrators can create annotation profiles.Therefore, each round of annotation has associated its own set of guidelines and concept types. Annotation rounds may prompt unanticipated issues, which may lead to changes in annotation guidelines, and even in the set of annotation types. This annotation tool keeps track of the work done by each annotator at every round. Often, the annotation project involves several annotators and is conducted in multiple rounds to guarantee the quality of the final annotations. This formalisation typically occurs after the preliminary meetings with annotators, and is meant to guide the annotation process, help annotators decide on (or disambiguate) textual mentions, and leverage annotators' domain expertise. The concepts of interest, in particular the different types of concepts and their association, are identified manually and their semantics is formalised in a set of annotation guidelines. The documents to be annotated are automatically retrieved from an online source or uploaded by the administrator. At initiation, the annotation goal of the project is established and the team is defined. The project administrator and the team of annotators have one shared goal: to carry out the work adequately to meet the project's objectives. More information here.Īlso, you should change the maximum execution time of long duration scriptsĬonfigure::write('scriptTimeLimit', 3600) Ī project accounts for the following main components set of documents or corpus, species or concepts of interest, annotations, and users (administrator and annotators). So the emails are sent from the gmail account named to my. you should edit the file app/Config/ specify an email account or an SMTP server.For example:Īnd you should include your email profile in app/Config/core.phpĬonfigure::write('emailProfile', 'gmail') In order to that tool be able to send results to your email, or to reset your password.if you want to make Marky responsible for removing all database resources, you should set the variable deleteCascade on app/Config/core.php to true.If you have the database configured with delete cascade, you should set the variable deleteCascade in file app/Config/core.php to false (default option):Ĭonfigure::write('deleteCascade', false).This annotation tool supports two models of resource elimination. Finally, you have to access the Marky's web and create the first administration account.# AllowOverride All # HERE PUT None, change to All # Options Indexes FollowSymLinks MultiViews For example, a MySQL account with user "server" and the password "server" would look like: Edit app/Config/database.php and set the user account to be used in accessing the database.Alter the code according to your preference. Edit app/Config/core.php and change Security.salt and Security.cipherSeed.Add permissions readable, writable and executable to Marky folder.The folder Marky should be placed in the directory of apache /www.Apache Web server, with PHP 5.5 installed and the module mod_rewrite enabled.A database engine such as MySQL, Oracle, etc.The following dependencies are required to install this annotation tool When I try to navigate the documents I get an error saying:"The users round could not be saved".I'm unable to print the annotated document, what I can do?.I deleted an entry but it is still marked, what happened?.I'm trying to edit an entry and I get an alert window.Which browsers can I use to execute Marky annotation framework?.Can I annotate the same text with different annotation types?.How to see my statistics for a project?.I would like to create projects for different domains, is it possible?.I uploaded documents from other places and do not look the same.I imported a PubMed document and the contents look strange.The processing of agreement tables is taking too long, is it normal?.Recurring doubts in project administration.How to see all annotations in a round with answers?.How to inspect annotations and assess agreement?.How to associate notes to annotation types?.How to import types from other projects?.How to create a type or class of annotation?.How to specify which documents are to be annotated?.How to install and run Marky annotation software.
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